Flagship Inn

At Flagship Inn & Suites in Boothbay Harbor, Maine, our number one priority is our guests. We know that you’re tired of being frustrated at having to choose between cost and comfort – and that’s why we’re here to help you be the hero of your coastal Maine getaway. We offer affordable accommodations with amazing service and comfort, making it easy to choose us as your home away from home for your vacation!

Affordable Comfort & Service

We pride ourselves on attentive and hospitable service and comfort at an affordable cost. We love welcoming guests to Boothbay Harbor, sharing our favorite local attractions and destinations, and hearing about our guests’ amazing coastal Maine experiences.

Our heated outdoor pool, complimentary breakfastpet-friendly rooms, and family suites are often what draw guests in, but our seasoned staff and convenient location are what brings them back time and time again.

Locally owned and operated, our hotel in Boothbay Harbor is known for our friendly and attentive service. The majority of our staff have been with us for 15-20 years, and they are a big part of what makes our property so special. Their attention to guests’ details provides that “home away from home” feeling and they are always ready to serve!

Convenient Location

Our property is adjacent to the many walking trails at Penny Lake Preserve (connected by a footbridge) and just a 0.6 mile stroll down the roadside sidewalk to the water’s edge in the mouth of the harbor. If you’re traveling with kids or are a kid at heart, you’ll love the outdoor playground equipment and nearby sports fields and tennis courts.